Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RIPK2O43353 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.88■□□□□ 0.45
RIPK2O43353 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RIPK2O43353 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
RIPK2O43353 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.87■□□□□ 0.45
RIPK2O43353 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 AL162727.3-201ENST00000635661 2787 ntBASIC17.87■□□□□ 0.45
RIPK2O43353 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.87■□□□□ 0.45
RIPK2O43353 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RIPK2O43353 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.87■□□□□ 0.45
RIPK2O43353 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.87■□□□□ 0.45
RIPK2O43353 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 AC078925.2-201ENST00000624013 1973 ntBASIC17.87■□□□□ 0.45
RIPK2O43353 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.87■□□□□ 0.45
RIPK2O43353 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RIPK2O43353 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
RIPK2O43353 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.87■□□□□ 0.45
RIPK2O43353 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RIPK2O43353 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RIPK2O43353 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 TSPY14P-201ENST00000303979 915 ntBASIC17.86■□□□□ 0.45
RIPK2O43353 INGX-201ENST00000359239 846 ntBASIC17.86■□□□□ 0.45
RIPK2O43353 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 UBE2SP1-201ENST00000450587 669 ntBASIC17.86■□□□□ 0.45
RIPK2O43353 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.86■□□□□ 0.45
RIPK2O43353 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 AC142381.4-202ENST00000563973 229 ntBASIC17.86■□□□□ 0.45
RIPK2O43353 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.86■□□□□ 0.45
RIPK2O43353 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RIPK2O43353 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RIPK2O43353 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RIPK2O43353 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RIPK2O43353 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.86■□□□□ 0.45
RIPK2O43353 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.86■□□□□ 0.45
RIPK2O43353 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RIPK2O43353 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.85■□□□□ 0.45
RIPK2O43353 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms