Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NDUFA1O15239 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.06□□□□□ -0.48
NDUFA1O15239 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 UNC93B2-201ENST00000285383 730 ntBASIC12.06□□□□□ -0.48
NDUFA1O15239 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
NDUFA1O15239 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC12.06□□□□□ -0.48
NDUFA1O15239 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 AC099343.3-201ENST00000605834 2503 ntBASIC12.06□□□□□ -0.48
NDUFA1O15239 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.06□□□□□ -0.48
NDUFA1O15239 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.06□□□□□ -0.48
NDUFA1O15239 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NDUFA1O15239 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
NDUFA1O15239 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA1O15239 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NDUFA1O15239 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NDUFA1O15239 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA1O15239 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 AL603756.1-201ENST00000606511 2163 ntBASIC12.05□□□□□ -0.48
NDUFA1O15239 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 PRORSD1P-201ENST00000295112 541 ntBASIC12.05□□□□□ -0.48
NDUFA1O15239 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA1O15239 MIR718-201ENST00000390190 70 ntBASIC12.05□□□□□ -0.48
NDUFA1O15239 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.05□□□□□ -0.48
NDUFA1O15239 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.05□□□□□ -0.48
NDUFA1O15239 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.05□□□□□ -0.48
NDUFA1O15239 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFA1O15239 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.05□□□□□ -0.48
NDUFA1O15239 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.05□□□□□ -0.48
NDUFA1O15239 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA1O15239 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.05□□□□□ -0.48
NDUFA1O15239 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA1O15239 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NDUFA1O15239 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NDUFA1O15239 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NDUFA1O15239 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.04□□□□□ -0.48
NDUFA1O15239 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NDUFA1O15239 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms