Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH17O14917 AC138894.3-201ENST00000603787 634 ntBASIC16.82■□□□□ 0.28
PCDH17O14917 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDH17O14917 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH17O14917 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDH17O14917 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDH17O14917 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PCDH17O14917 AC108860.2-201ENST00000562760 2183 ntBASIC16.82■□□□□ 0.28
PCDH17O14917 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDH17O14917 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH17O14917 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDH17O14917 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH17O14917 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH17O14917 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 AC080080.1-201ENST00000625121 2420 ntBASIC16.81■□□□□ 0.28
PCDH17O14917 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH17O14917 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH17O14917 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PCDH17O14917 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 PCDHA12-202ENST00000613593 2588 ntBASIC16.81■□□□□ 0.28
PCDH17O14917 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH17O14917 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDH17O14917 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDH17O14917 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH17O14917 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH17O14917 SIRPAP1-201ENST00000448467 1770 ntBASIC16.81■□□□□ 0.28
PCDH17O14917 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDH17O14917 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH17O14917 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 AC097374.2-201ENST00000618617 1306 ntBASIC16.8■□□□□ 0.28
PCDH17O14917 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 DUTP2-201ENST00000519164 463 ntBASIC16.8■□□□□ 0.28
PCDH17O14917 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH17O14917 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDH17O14917 BNIP3P18-201ENST00000593976 575 ntBASIC16.8■□□□□ 0.28
PCDH17O14917 AL138831.2-201ENST00000606564 490 ntBASIC16.8■□□□□ 0.28
PCDH17O14917 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 AC009053.2-201ENST00000563701 2365 ntBASIC16.8■□□□□ 0.28
PCDH17O14917 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH17O14917 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDH17O14917 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH17O14917 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH17O14917 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH17O14917 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
PCDH17O14917 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDH17O14917 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH17O14917 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms