Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 AC009949.1-201ENST00000623048 1830 ntBASIC20.36■□□□□ 0.85
USP17L11C9JVI0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP17L11C9JVI0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 AC108073.2-201ENST00000464002 357 ntBASIC20.35■□□□□ 0.85
USP17L11C9JVI0 IGHV3-65-201ENST00000523210 341 ntBASIC20.35■□□□□ 0.85
USP17L11C9JVI0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.35■□□□□ 0.85
USP17L11C9JVI0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 VN2R19P-201ENST00000442399 1052 ntBASIC20.34■□□□□ 0.85
USP17L11C9JVI0 RPS15P9-201ENST00000494093 319 ntBASIC20.34■□□□□ 0.85
USP17L11C9JVI0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 AC008667.4-201ENST00000607370 168 ntBASIC20.34■□□□□ 0.85
USP17L11C9JVI0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.34■□□□□ 0.85
USP17L11C9JVI0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 BX276092.7-203ENST00000637198 1536 ntBASIC20.33■□□□□ 0.85
USP17L11C9JVI0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 PMS2P2-201ENST00000425039 1128 ntBASIC20.33■□□□□ 0.85
USP17L11C9JVI0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.33■□□□□ 0.85
USP17L11C9JVI0 MIR4751-201ENST00000578027 74 ntBASIC20.33■□□□□ 0.85
USP17L11C9JVI0 STK25P1-201ENST00000585406 838 ntBASIC20.33■□□□□ 0.85
USP17L11C9JVI0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 AC002310.6-201ENST00000624451 1377 ntBASIC20.33■□□□□ 0.84
USP17L11C9JVI0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
USP17L11C9JVI0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP17L11C9JVI0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms