Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 COX5BP2-201ENST00000392354 334 ntBASIC14.17□□□□□ -0.14
SRRM4A7MD48 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 KRT18P21-201ENST00000515767 1272 ntBASIC14.17□□□□□ -0.14
SRRM4A7MD48 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 AC124864.1-201ENST00000623408 392 ntBASIC14.17□□□□□ -0.14
SRRM4A7MD48 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.17□□□□□ -0.14
SRRM4A7MD48 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SRRM4A7MD48 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 AL031133.1-201ENST00000406807 723 ntBASIC14.16□□□□□ -0.14
SRRM4A7MD48 AL845331.1-201ENST00000424978 1190 ntBASIC14.16□□□□□ -0.14
SRRM4A7MD48 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SRRM4A7MD48 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SRRM4A7MD48 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SRRM4A7MD48 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.15□□□□□ -0.14
SRRM4A7MD48 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms