Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LINC01558Q9Y6Z2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
LINC01558Q9Y6Z2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CICP20-201ENST00000443330 2801 ntBASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 MYO15B-237ENST00000642007 4893 ntBASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 HLA-G-202ENST00000376815 851 ntBASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SMUG1P1-201ENST00000590640 811 ntBASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 AL356652.1-201ENST00000615962 565 ntBASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 AC092364.2-201ENST00000596710 2692 ntBASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 HLA-J-201ENST00000462773 1622 ntBASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC9.08□□□□□ -0.96
LINC01558Q9Y6Z2 RNF216P1-203ENST00000404404 2427 ntBASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LINC01558Q9Y6Z2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms