Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 AC140658.5-201ENST00000438532 169 ntBASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 BX323043.1-201ENST00000641006 1765 ntBASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 AC112191.1-201ENST00000523689 701 ntBASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 AL138781.2-201ENST00000617896 1843 ntBASIC19.1■□□□□ 0.65
SCN10AQ9Y5Y9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 AC093520.2-201ENST00000561830 333 ntBASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SCN10AQ9Y5Y9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 AC004835.2-201ENST00000603762 682 ntBASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.08■□□□□ 0.65
SCN10AQ9Y5Y9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.08■□□□□ 0.64
SCN10AQ9Y5Y9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 KRT18P32-201ENST00000424695 1287 ntBASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 FAM185BP-201ENST00000443595 716 ntBASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 AC138028.4-201ENST00000564984 1845 ntBASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 AC098818.2-201ENST00000564925 2320 ntBASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SCN10AQ9Y5Y9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms