Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC233263.1-201ENST00000578059 224 ntBASIC16.68■□□□□ 0.26
AP4S1Q9Y587 AP000692.2-201ENST00000608391 879 ntBASIC16.68■□□□□ 0.26
AP4S1Q9Y587 MIR6786-201ENST00000616843 113 ntBASIC16.68■□□□□ 0.26
AP4S1Q9Y587 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP4S1Q9Y587 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 AC006449.5-201ENST00000610658 2098 ntBASIC16.67■□□□□ 0.26
AP4S1Q9Y587 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 B3GAT3P1-201ENST00000471720 806 ntBASIC16.67■□□□□ 0.26
AP4S1Q9Y587 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 AC110285.5-201ENST00000611501 352 ntBASIC16.67■□□□□ 0.26
AP4S1Q9Y587 MIR5787-201ENST00000611784 55 ntBASIC16.67■□□□□ 0.26
AP4S1Q9Y587 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP4S1Q9Y587 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 AC069152.1-201ENST00000438030 544 ntBASIC16.66■□□□□ 0.26
AP4S1Q9Y587 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 AC124016.1-201ENST00000609552 612 ntBASIC16.66■□□□□ 0.26
AP4S1Q9Y587 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.66■□□□□ 0.26
AP4S1Q9Y587 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4S1Q9Y587 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
AP4S1Q9Y587 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP4S1Q9Y587 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
AP4S1Q9Y587 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.65■□□□□ 0.26
AP4S1Q9Y587 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.65■□□□□ 0.26
AP4S1Q9Y587 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP4S1Q9Y587 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms