Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 FAM220CP-201ENST00000395253 831 ntBASIC17.7■□□□□ 0.42
PKP3Q9Y446 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.7■□□□□ 0.42
PKP3Q9Y446 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP3Q9Y446 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 AC133963.1-201ENST00000504166 1679 ntBASIC17.69■□□□□ 0.42
PKP3Q9Y446 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 IGHV3-47-201ENST00000425060 335 ntBASIC17.69■□□□□ 0.42
PKP3Q9Y446 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 AC096582.2-201ENST00000510860 516 ntBASIC17.69■□□□□ 0.42
PKP3Q9Y446 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP3Q9Y446 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP3Q9Y446 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 REXO1L11P-201ENST00000620964 1927 ntBASIC17.68■□□□□ 0.42
PKP3Q9Y446 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 LINC00304-203ENST00000565008 1864 ntBASIC17.68■□□□□ 0.42
PKP3Q9Y446 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP3Q9Y446 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.68■□□□□ 0.42
PKP3Q9Y446 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms