Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 TMPOP1-202ENST00000424642 1267 ntBASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 BX664615.1-201ENST00000443558 458 ntBASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 KRT18P57-201ENST00000443599 1254 ntBASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 AC010203.1-204ENST00000548782 407 ntBASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 KRT8P32-201ENST00000512863 1461 ntBASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 CROCCP2-202ENST00000412962 2773 ntBASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
R3HCC1Q9Y3T6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 FAM210CP-201ENST00000445714 574 ntBASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 AC141257.4-201ENST00000634557 245 ntBASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 AC136944.6-201ENST00000634818 245 ntBASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 AL031432.5-201ENST00000641059 760 ntBASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
R3HCC1Q9Y3T6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 CR769767.2-201ENST00000622735 460 ntBASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 AC036111.1-201ENST00000533973 1582 ntBASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.2■□□□□ 0.82
R3HCC1Q9Y3T6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
R3HCC1Q9Y3T6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms