Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 AC016734.2-201ENST00000624325 1377 ntBASIC16.63■□□□□ 0.25
RNF6Q9Y252 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF6Q9Y252 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 AC112497.1-201ENST00000624824 639 ntBASIC16.62■□□□□ 0.25
RNF6Q9Y252 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF6Q9Y252 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF6Q9Y252 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 AC099343.3-201ENST00000605834 2503 ntBASIC16.61■□□□□ 0.25
RNF6Q9Y252 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 AC079602.3-201ENST00000623931 403 ntBASIC16.61■□□□□ 0.25
RNF6Q9Y252 AL157888.1-201ENST00000631930 593 ntBASIC16.61■□□□□ 0.25
RNF6Q9Y252 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF6Q9Y252 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF6Q9Y252 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms