Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 AC145285.6-201ENST00000604632 637 ntBASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2BQ9UQN3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 LYSMD4-203ENST00000378904 2122 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 TSPY12P-201ENST00000421279 868 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 KRT18P48-201ENST00000434763 852 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 AC112698.1-201ENST00000510299 916 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 AC010203.1-204ENST00000548782 407 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 AL441883.1-201ENST00000566170 1045 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 AC140113.3-201ENST00000605663 199 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 AC009154.2-201ENST00000621177 724 ntBASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2BQ9UQN3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 AC087499.1-201ENST00000418141 1075 ntBASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 BX276092.7-203ENST00000637198 1536 ntBASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2BQ9UQN3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHMP2BQ9UQN3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms