Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SNX6Q9UNH7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX6Q9UNH7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SNX6Q9UNH7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNX6Q9UNH7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNX6Q9UNH7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.06■□□□□ 0.32
SNX6Q9UNH7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 AC096633.1-201ENST00000422446 749 ntBASIC17.06■□□□□ 0.32
SNX6Q9UNH7 AC005104.2-201ENST00000427818 678 ntBASIC17.06■□□□□ 0.32
SNX6Q9UNH7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 RNF126P1-202ENST00000569893 925 ntBASIC17.06■□□□□ 0.32
SNX6Q9UNH7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SNX6Q9UNH7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 AL671277.2-201ENST00000458060 996 ntBASIC17.05■□□□□ 0.32
SNX6Q9UNH7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 GUSBP12-201ENST00000513727 720 ntBASIC17.05■□□□□ 0.32
SNX6Q9UNH7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 AC083849.1-201ENST00000615227 514 ntBASIC17.05■□□□□ 0.32
SNX6Q9UNH7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.05■□□□□ 0.32
SNX6Q9UNH7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SNX6Q9UNH7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 AC097374.2-201ENST00000618617 1306 ntBASIC17.04■□□□□ 0.32
SNX6Q9UNH7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 TNRC18P3-201ENST00000441896 2691 ntBASIC17.04■□□□□ 0.32
SNX6Q9UNH7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNX6Q9UNH7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms