Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 AP000523.1-201ENST00000398242 1049 ntBASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 AC009947.2-201ENST00000444014 672 ntBASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGB4Q9UN71 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 HMGA1P5-201ENST00000412453 271 ntBASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 NEK4P2-201ENST00000580004 1012 ntBASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 AC022898.2-201ENST00000616822 1312 ntBASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 LINC00554-201ENST00000564841 3011 ntBASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 AC105020.1-201ENST00000435356 2205 ntBASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGB4Q9UN71 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 SEC1P-202ENST00000473944 940 ntBASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 CYP2D8P-201ENST00000433633 1490 ntBASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHGB4Q9UN71 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms