Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.29■■□□□ 1
DENND2AQ9ULE3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DENND2AQ9ULE3 AC004706.3-202ENST00000621574 984 ntBASIC21.29■■□□□ 1
DENND2AQ9ULE3 PGM5P2-202ENST00000637225 1043 ntBASIC21.29■■□□□ 1
DENND2AQ9ULE3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DENND2AQ9ULE3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DENND2AQ9ULE3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DENND2AQ9ULE3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.29■■□□□ 1
DENND2AQ9ULE3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.29■■□□□ 1
DENND2AQ9ULE3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
DENND2AQ9ULE3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
DENND2AQ9ULE3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 TERC-201ENST00000602385 541 ntBASIC21.28■■□□□ 1
DENND2AQ9ULE3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.28■■□□□ 1
DENND2AQ9ULE3 NCF1C-201ENST00000438382 1427 ntBASIC21.28■■□□□ 1
DENND2AQ9ULE3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DENND2AQ9ULE3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.27■■□□□ 1
DENND2AQ9ULE3 AC009336.1-201ENST00000608941 1553 ntBASIC21.27■■□□□ 1
DENND2AQ9ULE3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.27■■□□□ 1
DENND2AQ9ULE3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 AL133373.2-201ENST00000623187 2828 ntBASIC21.27■■□□□ 1
DENND2AQ9ULE3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 AC136632.2-201ENST00000512891 861 ntBASIC21.27■■□□□ 1
DENND2AQ9ULE3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.27■■□□□ 1
DENND2AQ9ULE3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.27■■□□□ 1
DENND2AQ9ULE3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
DENND2AQ9ULE3 AC027601.4-201ENST00000611259 610 ntBASIC21.27■■□□□ 1
DENND2AQ9ULE3 AC005593.1-201ENST00000624894 515 ntBASIC21.27■■□□□ 1
DENND2AQ9ULE3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.27■■□□□ 1
DENND2AQ9ULE3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DENND2AQ9ULE3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
DENND2AQ9ULE3 PMS2P7-201ENST00000506558 1336 ntBASIC21.27■□□□□ 0.99
DENND2AQ9ULE3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 MIR940-201ENST00000401276 94 ntBASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DENND2AQ9ULE3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DENND2AQ9ULE3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms