Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLIP2Q9UDT6 AP005117.1-201ENST00000584346 1413 ntBASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 AC096633.1-201ENST00000422446 749 ntBASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 ABCD1P5-201ENST00000445663 754 ntBASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 AC079776.4-201ENST00000511039 504 ntBASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 AL662844.1-201ENST00000546340 181 ntBASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 AC134043.2-201ENST00000624206 2238 ntBASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 AC010460.3-201ENST00000511359 1579 ntBASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.87■□□□□ 0.93
CLIP2Q9UDT6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 HLA-A-201ENST00000376802 1334 ntBASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 FAM220CP-201ENST00000395253 831 ntBASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 FGFR3P6-201ENST00000457012 610 ntBASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLIP2Q9UDT6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 RBM17P3-201ENST00000417687 1192 ntBASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLIP2Q9UDT6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.84■□□□□ 0.93
CLIP2Q9UDT6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms