Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM248Q9NWD8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.97■□□□□ 0.47
TMEM248Q9NWD8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM248Q9NWD8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM248Q9NWD8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 AL356309.3-201ENST00000624132 1934 ntBASIC17.96■□□□□ 0.47
TMEM248Q9NWD8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 AL121912.1-201ENST00000603683 238 ntBASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM248Q9NWD8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 AC148477.5-201ENST00000625164 1645 ntBASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 AC046185.3-201ENST00000623228 1824 ntBASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 SCARNA2-201ENST00000458748 420 ntBASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.94■□□□□ 0.46
TMEM248Q9NWD8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms