Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
HPS4Q9NQG7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 COX5BP2-201ENST00000392354 334 ntBASIC18.2■□□□□ 0.5
HPS4Q9NQG7 AC073621.1-201ENST00000392730 636 ntBASIC18.2■□□□□ 0.5
HPS4Q9NQG7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.2■□□□□ 0.5
HPS4Q9NQG7 AC010327.4-202ENST00000591484 748 ntBASIC18.2■□□□□ 0.5
HPS4Q9NQG7 AC073592.5-201ENST00000624854 528 ntBASIC18.2■□□□□ 0.5
HPS4Q9NQG7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.2■□□□□ 0.5
HPS4Q9NQG7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 AL390961.4-201ENST00000623958 2535 ntBASIC18.19■□□□□ 0.5
HPS4Q9NQG7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 YBX2P1-201ENST00000394192 760 ntBASIC18.19■□□□□ 0.5
HPS4Q9NQG7 RPSAP43-201ENST00000402237 625 ntBASIC18.19■□□□□ 0.5
HPS4Q9NQG7 UPF3AP3-201ENST00000420996 769 ntBASIC18.19■□□□□ 0.5
HPS4Q9NQG7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 AC022898.2-201ENST00000616822 1312 ntBASIC18.19■□□□□ 0.5
HPS4Q9NQG7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
HPS4Q9NQG7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 SIRPAP1-201ENST00000448467 1770 ntBASIC18.18■□□□□ 0.5
HPS4Q9NQG7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 GPX1P2-201ENST00000429271 606 ntBASIC18.18■□□□□ 0.5
HPS4Q9NQG7 AC103564.2-201ENST00000432853 1299 ntBASIC18.18■□□□□ 0.5
HPS4Q9NQG7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 AC006557.2-201ENST00000592985 1240 ntBASIC18.18■□□□□ 0.5
HPS4Q9NQG7 AL691403.2-201ENST00000618460 490 ntBASIC18.18■□□□□ 0.5
HPS4Q9NQG7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HPS4Q9NQG7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HPS4Q9NQG7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.17■□□□□ 0.5
HPS4Q9NQG7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.17■□□□□ 0.5
HPS4Q9NQG7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPS4Q9NQG7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPS4Q9NQG7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HPS4Q9NQG7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.17■□□□□ 0.5
HPS4Q9NQG7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.17■□□□□ 0.5
HPS4Q9NQG7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms