Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 AC132938.6-201ENST00000623828 1655 ntBASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
MS4A6AQ9H2W1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 MIR662-201ENST00000384847 95 ntBASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 VENTXP5-201ENST00000523979 775 ntBASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 NKILA-202ENST00000614771 2598 ntBASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MS4A6AQ9H2W1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 LINC00167-201ENST00000530583 1419 ntBASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 AC083849.1-201ENST00000615227 514 ntBASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.6□□□□□ -0.23
MS4A6AQ9H2W1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms