Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 ABALON-201ENST00000629058 1903 ntBASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.79■□□□□ 0.12
ZNF407Q9C0G0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 ELK2BP-201ENST00000415014 1224 ntBASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 BICD1-207ENST00000551848 1962 ntBASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 RPS2P28-201ENST00000314255 741 ntBASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 MIR1233-2-201ENST00000408138 82 ntBASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 MIR1233-1-201ENST00000408722 82 ntBASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 FAM197Y3-203ENST00000618346 717 ntBASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF407Q9C0G0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 ACTG1P4-201ENST00000425123 1122 ntBASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF407Q9C0G0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF407Q9C0G0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF407Q9C0G0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.77■□□□□ 0.11
ZNF407Q9C0G0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.77■□□□□ 0.11
ZNF407Q9C0G0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF407Q9C0G0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF407Q9C0G0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF407Q9C0G0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms