Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
NDC1Q9BTX1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NDC1Q9BTX1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NDC1Q9BTX1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NDC1Q9BTX1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
NDC1Q9BTX1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NDC1Q9BTX1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 FGFR3P6-201ENST00000457012 610 ntBASIC16.83■□□□□ 0.28
NDC1Q9BTX1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 SLC25A6P4-201ENST00000586535 553 ntBASIC16.83■□□□□ 0.28
NDC1Q9BTX1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 TP73-AS1-207ENST00000624167 988 ntBASIC16.83■□□□□ 0.28
NDC1Q9BTX1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.83■□□□□ 0.28
NDC1Q9BTX1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 FLJ13224-201ENST00000313737 1514 ntBASIC16.82■□□□□ 0.28
NDC1Q9BTX1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 COX5BP2-201ENST00000392354 334 ntBASIC16.82■□□□□ 0.28
NDC1Q9BTX1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 MRPL3P1-201ENST00000400109 1033 ntBASIC16.82■□□□□ 0.28
NDC1Q9BTX1 KRT18P67-201ENST00000432816 1264 ntBASIC16.82■□□□□ 0.28
NDC1Q9BTX1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 AC079776.4-201ENST00000511039 504 ntBASIC16.82■□□□□ 0.28
NDC1Q9BTX1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 AP000997.3-201ENST00000623333 2250 ntBASIC16.82■□□□□ 0.28
NDC1Q9BTX1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
NDC1Q9BTX1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
NDC1Q9BTX1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms