Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 AC020916.1-201ENST00000587762 1774 ntBASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 AL691432.3-201ENST00000621860 400 ntBASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CCM2Q9BSQ5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 AC133963.1-201ENST00000504166 1679 ntBASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 HLA-J-201ENST00000462773 1622 ntBASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCM2Q9BSQ5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 AC002558.1-201ENST00000488906 803 ntBASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 IGHV3-52-201ENST00000519770 353 ntBASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 AC109462.3-201ENST00000573934 613 ntBASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 AL732292.2-201ENST00000609649 430 ntBASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 AC019129.2-201ENST00000609837 1235 ntBASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCM2Q9BSQ5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 OR6D1P-202ENST00000641007 5290 ntBASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 AL049757.1-201ENST00000616842 1596 ntBASIC17.32■□□□□ 0.36
CCM2Q9BSQ5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 AC132008.2-207ENST00000454517 770 ntBASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCM2Q9BSQ5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms