Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40CQ96S21 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40CQ96S21 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 AL139384.1-201ENST00000612143 3047 ntBASIC14.3□□□□□ -0.12
RAB40CQ96S21 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB40CQ96S21 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40CQ96S21 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.29□□□□□ -0.12
RAB40CQ96S21 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 AC010240.3-201ENST00000607688 395 ntBASIC14.29□□□□□ -0.12
RAB40CQ96S21 CR769767.2-201ENST00000622735 460 ntBASIC14.29□□□□□ -0.12
RAB40CQ96S21 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB40CQ96S21 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 LINC00167-201ENST00000530583 1419 ntBASIC14.29□□□□□ -0.12
RAB40CQ96S21 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB40CQ96S21 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms