Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 MIPEPP3-201ENST00000412105 444 ntBASIC16.6■□□□□ 0.25
NR1H4Q96RI1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 RCC2P3-201ENST00000418112 1537 ntBASIC16.6■□□□□ 0.25
NR1H4Q96RI1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NR1H4Q96RI1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 DUSP5P2-201ENST00000426873 1033 ntBASIC16.59■□□□□ 0.25
NR1H4Q96RI1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.59■□□□□ 0.25
NR1H4Q96RI1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 AL121906.2-201ENST00000621597 723 ntBASIC16.59■□□□□ 0.25
NR1H4Q96RI1 AC006557.6-201ENST00000623071 864 ntBASIC16.59■□□□□ 0.25
NR1H4Q96RI1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H4Q96RI1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.58■□□□□ 0.25
NR1H4Q96RI1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 KRT8P41-201ENST00000533985 1514 ntBASIC16.58■□□□□ 0.24
NR1H4Q96RI1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 AC078925.2-201ENST00000624013 1973 ntBASIC16.58■□□□□ 0.24
NR1H4Q96RI1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H4Q96RI1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms