Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 IGHV3-72-202ENST00000621503 303 ntBASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.88□□□□□ -0.03
CSMD1Q96PZ7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 AC009102.3-201ENST00000623118 1491 ntBASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 RNF165-205ENST00000588679 2904 ntBASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 AC100803.2-201ENST00000562459 1963 ntBASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CSMD1Q96PZ7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 AC097493.3-201ENST00000509725 367 ntBASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 KRT8P48-201ENST00000515599 1220 ntBASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 SLC25A39P2-201ENST00000537614 270 ntBASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 AL353135.1-201ENST00000606729 504 ntBASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 AC008667.4-201ENST00000607370 168 ntBASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 NEFHP1-201ENST00000412845 2629 ntBASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CSMD1Q96PZ7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CSMD1Q96PZ7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms