Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LRRC3BQ96PB8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3BQ96PB8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3BQ96PB8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC3BQ96PB8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.9■□□□□ 0.46
LRRC3BQ96PB8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LRRC3BQ96PB8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC3BQ96PB8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC3BQ96PB8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC3BQ96PB8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRRC3BQ96PB8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 RFPL4AP1-201ENST00000530883 850 ntBASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 AL135999.2-201ENST00000622438 1686 ntBASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRRC3BQ96PB8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 ACTG1P4-201ENST00000425123 1122 ntBASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 AC074386.1-202ENST00000463561 864 ntBASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 AC027612.4-201ENST00000605371 583 ntBASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
LRRC3BQ96PB8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC3BQ96PB8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms