Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL121912.1-201ENST00000603683 238 ntBASIC18.16■□□□□ 0.5
RPRD1AQ96P16 AL031008.1-201ENST00000619963 541 ntBASIC18.16■□□□□ 0.5
RPRD1AQ96P16 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
RPRD1AQ96P16 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AC079781.3-201ENST00000449110 356 ntBASIC18.15■□□□□ 0.5
RPRD1AQ96P16 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AC019129.2-201ENST00000609837 1235 ntBASIC18.15■□□□□ 0.5
RPRD1AQ96P16 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AL355877.3-201ENST00000622820 899 ntBASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AD001527.2-201ENST00000622994 785 ntBASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AP000867.4-201ENST00000641616 219 ntBASIC18.15■□□□□ 0.5
RPRD1AQ96P16 AL049757.1-201ENST00000616842 1596 ntBASIC18.15■□□□□ 0.5
RPRD1AQ96P16 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 REXO1L11P-201ENST00000620964 1927 ntBASIC18.15■□□□□ 0.5
RPRD1AQ96P16 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.15■□□□□ 0.5
RPRD1AQ96P16 KRT8P10-201ENST00000450021 1447 ntBASIC18.15■□□□□ 0.5
RPRD1AQ96P16 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RPRD1AQ96P16 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.14■□□□□ 0.5
RPRD1AQ96P16 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.5
RPRD1AQ96P16 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 IGHV3-52-201ENST00000519770 353 ntBASIC18.14■□□□□ 0.49
RPRD1AQ96P16 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 AC073592.5-201ENST00000624854 528 ntBASIC18.14■□□□□ 0.49
RPRD1AQ96P16 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 PKD1P1-201ENST00000458669 6805 ntBASIC18.14■□□□□ 0.49
RPRD1AQ96P16 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPRD1AQ96P16 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 PMPCAP1-201ENST00000508114 1576 ntBASIC18.13■□□□□ 0.49
RPRD1AQ96P16 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 AC002558.1-201ENST00000488906 803 ntBASIC18.13■□□□□ 0.49
RPRD1AQ96P16 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RPRD1AQ96P16 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms