Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC46A1Q96NT5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 AC132938.6-201ENST00000623828 1655 ntBASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC46A1Q96NT5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 RFPL4AP1-201ENST00000530883 850 ntBASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 MIR3197-201ENST00000582241 73 ntBASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 AC004706.3-202ENST00000621574 984 ntBASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 C20orf181-201ENST00000623918 480 ntBASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 REXO1L9P-201ENST00000604264 2108 ntBASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC46A1Q96NT5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 KRT8P47-201ENST00000604727 1398 ntBASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC46A1Q96NT5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms