Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.17■□□□□ 0.5
C9orf72Q96LT7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
C9orf72Q96LT7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 AC091076.1-201ENST00000610741 619 ntBASIC18.16■□□□□ 0.5
C9orf72Q96LT7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.16■□□□□ 0.5
C9orf72Q96LT7 AL358472.4-201ENST00000633140 710 ntBASIC18.16■□□□□ 0.5
C9orf72Q96LT7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
C9orf72Q96LT7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C9orf72Q96LT7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.14■□□□□ 0.49
C9orf72Q96LT7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 AL671277.2-201ENST00000458060 996 ntBASIC18.14■□□□□ 0.49
C9orf72Q96LT7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 GCSHP2-201ENST00000560971 527 ntBASIC18.14■□□□□ 0.49
C9orf72Q96LT7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C9orf72Q96LT7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms