Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
IFT43Q96FT9 LINC00896-202ENST00000609602 2128 ntBASIC18.19■□□□□ 0.5
IFT43Q96FT9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
IFT43Q96FT9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 SLC25A6P5-201ENST00000435663 894 ntBASIC18.18■□□□□ 0.5
IFT43Q96FT9 FAAHP1-202ENST00000446499 1238 ntBASIC18.18■□□□□ 0.5
IFT43Q96FT9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 AC012615.1-201ENST00000565797 1299 ntBASIC18.18■□□□□ 0.5
IFT43Q96FT9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
IFT43Q96FT9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IFT43Q96FT9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 AC004870.1-201ENST00000315132 882 ntBASIC18.17■□□□□ 0.5
IFT43Q96FT9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.17■□□□□ 0.5
IFT43Q96FT9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.17■□□□□ 0.5
IFT43Q96FT9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 KRT18P55-202ENST00000578578 1546 ntBASIC18.17■□□□□ 0.5
IFT43Q96FT9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
IFT43Q96FT9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IFT43Q96FT9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 RN7SL510P-201ENST00000581311 263 ntBASIC18.16■□□□□ 0.5
IFT43Q96FT9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.16■□□□□ 0.5
IFT43Q96FT9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IFT43Q96FT9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms