Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RHBDF1Q96CC6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RHBDF1Q96CC6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RHBDF1Q96CC6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 AC091607.1-201ENST00000490318 1060 ntBASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 AL139327.4-201ENST00000612362 153 ntBASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RHBDF1Q96CC6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 TSSC2-201ENST00000450217 709 ntBASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 AC019129.2-201ENST00000609837 1235 ntBASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 IER3-202ENST00000376377 1350 ntBASIC17.13■□□□□ 0.33
RHBDF1Q96CC6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RHBDF1Q96CC6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms