Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.73■□□□□ 0.91
BRF1Q92994 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.72■□□□□ 0.91
BRF1Q92994 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 AL023806.1-201ENST00000603994 1649 ntBASIC20.72■□□□□ 0.91
BRF1Q92994 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BRF1Q92994 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.72■□□□□ 0.91
BRF1Q92994 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 LINC00265-3P-201ENST00000447588 903 ntBASIC20.72■□□□□ 0.91
BRF1Q92994 VENTXP7-201ENST00000475503 772 ntBASIC20.72■□□□□ 0.91
BRF1Q92994 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
BRF1Q92994 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
BRF1Q92994 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.72■□□□□ 0.91
BRF1Q92994 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.72■□□□□ 0.91
BRF1Q92994 AC069148.1-201ENST00000608741 768 ntBASIC20.72■□□□□ 0.91
BRF1Q92994 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BRF1Q92994 AC019129.2-201ENST00000609837 1235 ntBASIC20.72■□□□□ 0.91
BRF1Q92994 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.72■□□□□ 0.91
BRF1Q92994 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
BRF1Q92994 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BRF1Q92994 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.72■□□□□ 0.91
BRF1Q92994 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.72■□□□□ 0.91
BRF1Q92994 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF1Q92994 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.71■□□□□ 0.91
BRF1Q92994 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
BRF1Q92994 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRF1Q92994 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.71■□□□□ 0.91
BRF1Q92994 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
BRF1Q92994 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF1Q92994 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.71■□□□□ 0.91
BRF1Q92994 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
BRF1Q92994 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
BRF1Q92994 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF1Q92994 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF1Q92994 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.71■□□□□ 0.91
BRF1Q92994 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.71■□□□□ 0.91
BRF1Q92994 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF1Q92994 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF1Q92994 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
BRF1Q92994 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
BRF1Q92994 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
BRF1Q92994 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.7■□□□□ 0.9
BRF1Q92994 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BRF1Q92994 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
BRF1Q92994 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.7■□□□□ 0.9
BRF1Q92994 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BRF1Q92994 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.7■□□□□ 0.9
BRF1Q92994 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.7■□□□□ 0.9
BRF1Q92994 AC002558.1-201ENST00000488906 803 ntBASIC20.7■□□□□ 0.9
BRF1Q92994 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.7■□□□□ 0.9
BRF1Q92994 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
BRF1Q92994 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.7■□□□□ 0.9
BRF1Q92994 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
BRF1Q92994 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.7■□□□□ 0.9
BRF1Q92994 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF1Q92994 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.7■□□□□ 0.9
BRF1Q92994 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
BRF1Q92994 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF1Q92994 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF1Q92994 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
BRF1Q92994 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRF1Q92994 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRF1Q92994 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF1Q92994 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
BRF1Q92994 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRF1Q92994 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRF1Q92994 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.69■□□□□ 0.9
BRF1Q92994 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.69■□□□□ 0.9
BRF1Q92994 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.69■□□□□ 0.9
BRF1Q92994 AC109462.3-201ENST00000573934 613 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms