Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 AL441883.1-201ENST00000566170 1045 ntBASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40AQ8WXH6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 LINC00304-203ENST00000565008 1864 ntBASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 AC018695.7-201ENST00000624587 2492 ntBASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 MIR3180-5-201ENST00000583743 153 ntBASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 LINC01126-201ENST00000623515 1646 ntBASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAB40AQ8WXH6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 AC099343.3-201ENST00000605834 2503 ntBASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RAB40AQ8WXH6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms