Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 CRYGEP-201ENST00000412192 528 ntBASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 MTMR9LP-203ENST00000426597 1545 ntBASIC20.12■□□□□ 0.81
U2AF1L4Q8WU68 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 AL024508.2-201ENST00000607749 1894 ntBASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 AC018845.2-201ENST00000568326 409 ntBASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 AL513190.1-201ENST00000621254 727 ntBASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
U2AF1L4Q8WU68 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 BICD1-207ENST00000551848 1962 ntBASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 AC092474.2-201ENST00000424288 719 ntBASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 AC018470.1-201ENST00000624790 3129 ntBASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2AF1L4Q8WU68 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.09■□□□□ 0.81
U2AF1L4Q8WU68 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.09■□□□□ 0.81
U2AF1L4Q8WU68 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
U2AF1L4Q8WU68 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2AF1L4Q8WU68 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms