Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 KLF2P3-201ENST00000451977 1087 ntBASIC20.68■□□□□ 0.9
TRPM4Q8TD43 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 AC243562.1-201ENST00000560672 389 ntBASIC20.68■□□□□ 0.9
TRPM4Q8TD43 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRPM4Q8TD43 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 GAPDHP21-201ENST00000450301 1010 ntBASIC20.67■□□□□ 0.9
TRPM4Q8TD43 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 FAM86C2P-203ENST00000528684 1004 ntBASIC20.67■□□□□ 0.9
TRPM4Q8TD43 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 AC116407.2-201ENST00000613639 860 ntBASIC20.67■□□□□ 0.9
TRPM4Q8TD43 AP001059.3-201ENST00000619053 235 ntBASIC20.67■□□□□ 0.9
TRPM4Q8TD43 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 FO538757.1-201ENST00000623083 1397 ntBASIC20.67■□□□□ 0.9
TRPM4Q8TD43 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRPM4Q8TD43 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 AC140658.5-201ENST00000438532 169 ntBASIC20.66■□□□□ 0.9
TRPM4Q8TD43 AC007274.1-201ENST00000439805 662 ntBASIC20.66■□□□□ 0.9
TRPM4Q8TD43 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRPM4Q8TD43 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 AC073592.3-201ENST00000625118 1834 ntBASIC20.65■□□□□ 0.9
TRPM4Q8TD43 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRPM4Q8TD43 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms