Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.94□□□□□ -0.66
SVIPQ8NHG7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 MORC2-AS1-201ENST00000422995 2274 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 SLC27A6-202ENST00000395266 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 MIR193BHG-211ENST00000641433 5365 ntBASIC10.93□□□□□ -0.66
SVIPQ8NHG7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 TMPRSS3-201ENST00000291532 3193 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 AL713866.1-201ENST00000563320 3125 ntBASIC10.93□□□□□ -0.66
SVIPQ8NHG7 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
SVIPQ8NHG7 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 AC109347.1-201ENST00000562919 2036 ntBASIC10.92□□□□□ -0.66
SVIPQ8NHG7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 COLQ-201ENST00000383781 2784 ntTSL 5 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.92□□□□□ -0.66
SVIPQ8NHG7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms