Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 FAM201B-201ENST00000458407 597 ntBASIC17.15■□□□□ 0.34
HIPK4Q8NE63 AC097488.1-201ENST00000507834 756 ntBASIC17.15■□□□□ 0.34
HIPK4Q8NE63 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 ITM2C-210ENST00000620962 501 ntBASIC17.15■□□□□ 0.34
HIPK4Q8NE63 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HIPK4Q8NE63 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
HIPK4Q8NE63 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
HIPK4Q8NE63 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIPK4Q8NE63 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 AC100803.2-201ENST00000562459 1963 ntBASIC17.13■□□□□ 0.33
HIPK4Q8NE63 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 KRT18P29-201ENST00000397031 1267 ntBASIC17.13■□□□□ 0.33
HIPK4Q8NE63 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 AL391005.1-201ENST00000623953 2435 ntBASIC17.13■□□□□ 0.33
HIPK4Q8NE63 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIPK4Q8NE63 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 AL163051.1-201ENST00000569214 1512 ntBASIC17.12■□□□□ 0.33
HIPK4Q8NE63 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIPK4Q8NE63 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms