Protein–RNA interactions for Protein: Q8NDZ4

C3orf58, Deleted in autism protein 1, humanhuman

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58Q8NDZ4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 MYCLP1-201ENST00000372451 1075 ntBASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 KRT18P13-201ENST00000400056 1290 ntBASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 AL591424.1-201ENST00000442569 1213 ntBASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 PGM5P2-202ENST00000637225 1043 ntBASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C3orf58Q8NDZ4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 LINC00982-205ENST00000420957 435 ntBASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 AC092865.5-201ENST00000545435 363 ntBASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 AL353135.1-201ENST00000606729 504 ntBASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C3orf58Q8NDZ4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 LINC00304-203ENST00000565008 1864 ntBASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 BX842568.4-201ENST00000421222 227 ntBASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 AC108073.2-201ENST00000464002 357 ntBASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 RPS15P9-201ENST00000494093 319 ntBASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 AC139530.3-201ENST00000620344 690 ntBASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.65■□□□□ 0.58
C3orf58Q8NDZ4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
C3orf58Q8NDZ4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
C3orf58Q8NDZ4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms