Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 AC141586.5-201ENST00000624546 2050 ntBASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 ATP5G2P1-201ENST00000433580 426 ntBASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 PKD1P1-201ENST00000458669 6805 ntBASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM35BQ8NCS4 AC139713.2-201ENST00000641328 2723 ntBASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 AC103564.2-201ENST00000432853 1299 ntBASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 MINOS1P3-201ENST00000457048 203 ntBASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 IGHV3-52-201ENST00000519770 353 ntBASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM35BQ8NCS4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TMEM35BQ8NCS4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMEM35BQ8NCS4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.64■□□□□ 0.58
TMEM35BQ8NCS4 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.64■□□□□ 0.58
TMEM35BQ8NCS4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 LYSMD4-203ENST00000378904 2122 ntBASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 MYCLP1-201ENST00000372451 1075 ntBASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 AC011467.2-201ENST00000598425 242 ntBASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 AC019129.2-201ENST00000609837 1235 ntBASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 AL139327.4-201ENST00000612362 153 ntBASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 NSUN5P1-202ENST00000421140 1535 ntBASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 NSUN5P2-203ENST00000457352 1529 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms