Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 TUBB3P1-201ENST00000405796 1332 ntBASIC24.18■■□□□ 1.46
XRN1Q8IZH2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 TSPY16P-201ENST00000449843 468 ntBASIC24.18■■□□□ 1.46
XRN1Q8IZH2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
XRN1Q8IZH2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
XRN1Q8IZH2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC24.17■■□□□ 1.46
XRN1Q8IZH2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
XRN1Q8IZH2 AC092580.3-201ENST00000430932 139 ntBASIC24.17■■□□□ 1.46
XRN1Q8IZH2 AC005237.2-201ENST00000434368 219 ntBASIC24.17■■□□□ 1.46
XRN1Q8IZH2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC24.17■■□□□ 1.46
XRN1Q8IZH2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC24.17■■□□□ 1.46
XRN1Q8IZH2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
XRN1Q8IZH2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
XRN1Q8IZH2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC24.17■■□□□ 1.46
XRN1Q8IZH2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 SPCS2P4-201ENST00000436160 681 ntBASIC24.16■■□□□ 1.46
XRN1Q8IZH2 SLC25A39P2-201ENST00000537614 270 ntBASIC24.16■■□□□ 1.46
XRN1Q8IZH2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 AC046185.3-201ENST00000623228 1824 ntBASIC24.16■■□□□ 1.46
XRN1Q8IZH2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC24.16■■□□□ 1.46
XRN1Q8IZH2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 MIR943-201ENST00000401286 94 ntBASIC24.15■■□□□ 1.46
XRN1Q8IZH2 DUX4L17-201ENST00000557360 1267 ntBASIC24.15■■□□□ 1.46
XRN1Q8IZH2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 BASP1P1-201ENST00000430708 665 ntBASIC24.15■■□□□ 1.46
XRN1Q8IZH2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
XRN1Q8IZH2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
XRN1Q8IZH2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC24.14■■□□□ 1.46
XRN1Q8IZH2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
XRN1Q8IZH2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
XRN1Q8IZH2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
XRN1Q8IZH2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
XRN1Q8IZH2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
XRN1Q8IZH2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
XRN1Q8IZH2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
XRN1Q8IZH2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 MRPS18AP1-201ENST00000414458 589 ntBASIC24.13■■□□□ 1.45
XRN1Q8IZH2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC24.13■■□□□ 1.45
XRN1Q8IZH2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms