Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 FZD10-202ENST00000539839 3282 ntBASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC65Q8IXS2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 PP12613-201ENST00000424958 2230 ntBASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 KRT17P6-201ENST00000453795 1220 ntBASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 MIR3180-1-201ENST00000580374 94 ntBASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 MIR3180-3-201ENST00000584616 94 ntBASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 NPAP1P7-201ENST00000613027 823 ntBASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
CCDC65Q8IXS2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 AC103564.2-201ENST00000432853 1299 ntBASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 ATP5G2P1-201ENST00000433580 426 ntBASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 MINOS1P3-201ENST00000457048 203 ntBASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC65Q8IXS2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC65Q8IXS2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms