Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19■□□□□ 0.63
HERC6Q8IVU3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 AC004449.1-201ENST00000564240 433 ntBASIC19■□□□□ 0.63
HERC6Q8IVU3 AC093512.1-201ENST00000617969 520 ntBASIC19■□□□□ 0.63
HERC6Q8IVU3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HERC6Q8IVU3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19■□□□□ 0.63
HERC6Q8IVU3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19■□□□□ 0.63
HERC6Q8IVU3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19■□□□□ 0.63
HERC6Q8IVU3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HERC6Q8IVU3 ANO7L1-203ENST00000602586 1720 ntBASIC19■□□□□ 0.63
HERC6Q8IVU3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 HCG11-201ENST00000411553 5696 ntBASIC18.99■□□□□ 0.63
HERC6Q8IVU3 AC026471.1-201ENST00000564629 3026 ntBASIC18.99■□□□□ 0.63
HERC6Q8IVU3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 KLF4P1-201ENST00000412782 1185 ntBASIC18.99■□□□□ 0.63
HERC6Q8IVU3 RHOQP3-201ENST00000437982 621 ntBASIC18.99■□□□□ 0.63
HERC6Q8IVU3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 AC074386.1-202ENST00000463561 864 ntBASIC18.99■□□□□ 0.63
HERC6Q8IVU3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 AC004835.2-201ENST00000603762 682 ntBASIC18.99■□□□□ 0.63
HERC6Q8IVU3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HERC6Q8IVU3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.98■□□□□ 0.63
HERC6Q8IVU3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 AC003669.1-201ENST00000334569 611 ntBASIC18.98■□□□□ 0.63
HERC6Q8IVU3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 AL513210.1-201ENST00000629608 234 ntBASIC18.98■□□□□ 0.63
HERC6Q8IVU3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 AC025580.3-201ENST00000617932 1424 ntBASIC18.98■□□□□ 0.63
HERC6Q8IVU3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 ESPNP-201ENST00000270691 2015 ntBASIC18.98■□□□□ 0.63
HERC6Q8IVU3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HERC6Q8IVU3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.97■□□□□ 0.63
HERC6Q8IVU3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.97■□□□□ 0.63
HERC6Q8IVU3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms