Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 AC092368.3-202ENST00000574180 1591 ntBASIC16■□□□□ 0.15
CROCCP3Q8IVE0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CROCCP3Q8IVE0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 AC092437.1-201ENST00000624794 1048 ntBASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.99■□□□□ 0.15
CROCCP3Q8IVE0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 AF201337.1-201ENST00000520239 748 ntBASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 HLA-B-256ENST00000639848 1089 ntBASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 RCC2P3-201ENST00000418112 1537 ntBASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CROCCP3Q8IVE0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CROCCP3Q8IVE0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms