Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC25Q86WR0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 AC008687.5-201ENST00000593746 558 ntBASIC18.21■□□□□ 0.51
CCDC25Q86WR0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 AC079328.2-201ENST00000561241 3354 ntBASIC18.21■□□□□ 0.51
CCDC25Q86WR0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC25Q86WR0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.5
CCDC25Q86WR0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC25Q86WR0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 AC098590.1-201ENST00000468126 897 ntBASIC18.2■□□□□ 0.5
CCDC25Q86WR0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.2■□□□□ 0.5
CCDC25Q86WR0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC25Q86WR0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.19■□□□□ 0.5
CCDC25Q86WR0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC25Q86WR0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC25Q86WR0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms