Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.35■□□□□ 0.372e-8■□□□□ 9.9
LARP4Q71RC2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.192e-8■□□□□ 9.9
LARP4Q71RC2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.2■□□□□ 0.182e-8■□□□□ 9.9
LARP4Q71RC2 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.42e-8■□□□□ 9.9
LARP4Q71RC2 SERPINB6-203ENST00000380524 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.822e-8■□□□□ 9.9
LARP4Q71RC2 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.92e-8■□□□□ 9.9
LARP4Q71RC2 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.092e-8■□□□□ 9.9
LARP4Q71RC2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.74■■□□□ 1.233e-8■□□□□ 9.9
LARP4Q71RC2 MAP3K11-202ENST00000524848 2139 ntTSL 219.49■□□□□ 0.713e-8■□□□□ 9.9
LARP4Q71RC2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.613e-8■□□□□ 9.9
LARP4Q71RC2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.84■□□□□ 0.613e-8■□□□□ 9.9
LARP4Q71RC2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.383e-8■□□□□ 9.9
LARP4Q71RC2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.96■□□□□ 0.313e-8■□□□□ 9.9
LARP4Q71RC2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.93■□□□□ 0.33e-11■□□□□ 9.9
LARP4Q71RC2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.273e-8■□□□□ 9.9
LARP4Q71RC2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.193e-8■□□□□ 9.9
LARP4Q71RC2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.153e-8■□□□□ 9.9
LARP4Q71RC2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.13e-8■□□□□ 9.9
LARP4Q71RC2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.74□□□□□ -0.053e-8■□□□□ 9.9
LARP4Q71RC2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.24□□□□□ -0.133e-11■□□□□ 9.9
LARP4Q71RC2 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.67□□□□□ -0.223e-11■□□□□ 9.9
LARP4Q71RC2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.25□□□□□ -0.293e-8■□□□□ 9.9
LARP4Q71RC2 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.92□□□□□ -0.343e-8■□□□□ 9.9
LARP4Q71RC2 TRIM27-205ENST00000481474 7006 ntTSL 1 (best)11.03□□□□□ -0.643e-8■□□□□ 9.9
LARP4Q71RC2 TRIM27-203ENST00000414543 1813 ntTSL 310.01□□□□□ -0.813e-8■□□□□ 9.9
LARP4Q71RC2 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.973e-8■□□□□ 9.9
LARP4Q71RC2 UNC50-206ENST00000466492 482 ntTSL 27.42□□□□□ -1.223e-8■□□□□ 9.9
LARP4Q71RC2 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.82□□□□□ -1.323e-8■□□□□ 9.9
LARP4Q71RC2 UNC50-205ENST00000423713 489 ntTSL 25.73□□□□□ -1.493e-8■□□□□ 9.9
LARP4Q71RC2 C11orf58-210ENST00000531658 4258 ntTSL 1 (best)4.68□□□□□ -1.663e-8■□□□□ 9.9
LARP4Q71RC2 UNC50-202ENST00000393493 613 ntTSL 24.48□□□□□ -1.693e-8■□□□□ 9.9
LARP4Q71RC2 C11orf58-203ENST00000524461 2040 ntTSL 24.17□□□□□ -1.743e-8■□□□□ 9.9
LARP4Q71RC2 CTSL-204ENST00000375894 975 ntTSL 312.28□□□□□ -0.442e-6■□□□□ 9.9
LARP4Q71RC2 FKBP1A-206ENST00000460490 694 ntTSL 28.18□□□□□ -1.13e-7■□□□□ 9.9
LARP4Q71RC2 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.68□□□□□ -1.343e-7■□□□□ 9.9
LARP4Q71RC2 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.412e-18■□□□□ 9.9
LARP4Q71RC2 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.333e-7■□□□□ 9.9
LARP4Q71RC2 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.863e-7■□□□□ 9.9
LARP4Q71RC2 PRPF8-203ENST00000571958 380 ntTSL 39.03□□□□□ -0.963e-7■□□□□ 9.9
LARP4Q71RC2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.35■■□□□ 1.334e-12■□□□□ 9.9
LARP4Q71RC2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.224e-12■□□□□ 9.9
LARP4Q71RC2 YWHAH-205ENST00000471374 1735 ntTSL 217.99■□□□□ 0.474e-12■□□□□ 9.9
LARP4Q71RC2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.365e-9■□□□□ 9.9
LARP4Q71RC2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.77■□□□□ 0.125e-9■□□□□ 9.9
LARP4Q71RC2 SPAG9-215ENST00000513746 822 ntTSL 514.77□□□□□ -0.055e-9■□□□□ 9.9
LARP4Q71RC2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.175e-9■□□□□ 9.9
LARP4Q71RC2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.77□□□□□ -0.25e-9■□□□□ 9.9
LARP4Q71RC2 SPAG9-217ENST00000513906 750 ntTSL 58.49□□□□□ -1.055e-9■□□□□ 9.9
LARP4Q71RC2 SPAG9-219ENST00000514613 2523 ntTSL 27.02□□□□□ -1.295e-9■□□□□ 9.9
LARP4Q71RC2 SPAG9-204ENST00000505173 2369 ntTSL 56.42□□□□□ -1.385e-9■□□□□ 9.9
LARP4Q71RC2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.38□□□□□ -1.395e-9■□□□□ 9.9
LARP4Q71RC2 TOP2A-203ENST00000577706 554 ntTSL 25.29□□□□□ -1.562e-10■□□□□ 9.9
LARP4Q71RC2 RPL17-210ENST00000581091 573 ntTSL 211.09□□□□□ -0.632e-9■□□□□ 9.8
LARP4Q71RC2 STARD3-229ENST00000585269 1346 ntTSL 521.11■□□□□ 0.972e-8■□□□□ 9.8
LARP4Q71RC2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.47■□□□□ 0.872e-8■□□□□ 9.8
LARP4Q71RC2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.35■□□□□ 0.692e-8■□□□□ 9.8
LARP4Q71RC2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.52e-8■□□□□ 9.8
LARP4Q71RC2 STARD3-205ENST00000471896 2129 ntTSL 216.93■□□□□ 0.32e-8■□□□□ 9.8
LARP4Q71RC2 STARD3-227ENST00000584850 2442 ntTSL 216■□□□□ 0.152e-8■□□□□ 9.8
LARP4Q71RC2 STARD3-208ENST00000488876 2404 ntTSL 214.52□□□□□ -0.092e-8■□□□□ 9.8
LARP4Q71RC2 STARD3-206ENST00000481171 3451 ntTSL 210.41□□□□□ -0.742e-8■□□□□ 9.8
LARP4Q71RC2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.83■■□□□ 1.727e-10■□□□□ 9.8
LARP4Q71RC2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.487e-10■□□□□ 9.8
LARP4Q71RC2 TCEA2-201ENST00000339217 953 ntTSL 323.91■■□□□ 1.427e-10■□□□□ 9.8
LARP4Q71RC2 TCEA2-216ENST00000487164 1060 ntTSL 1 (best)21.78■■□□□ 1.087e-10■□□□□ 9.8
LARP4Q71RC2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.451e-7■□□□□ 9.8
LARP4Q71RC2 TCEA2-205ENST00000415602 726 ntTSL 316.12■□□□□ 0.177e-10■□□□□ 9.8
LARP4Q71RC2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.161e-7■□□□□ 9.8
LARP4Q71RC2 TMEM177-206ENST00000496203 881 ntTSL 1 (best)15.23■□□□□ 0.031e-7■□□□□ 9.8
LARP4Q71RC2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.95□□□□□ -0.187e-10■□□□□ 9.8
LARP4Q71RC2 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.391e-7■□□□□ 9.8
LARP4Q71RC2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.24□□□□□ -0.451e-7■□□□□ 9.8
LARP4Q71RC2 TCEA2-214ENST00000476113 421 ntTSL 211.32□□□□□ -0.67e-10■□□□□ 9.8
LARP4Q71RC2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.343e-8■□□□□ 9.8
LARP4Q71RC2 S100A16-205ENST00000474991 640 ntTSL 216.48■□□□□ 0.233e-8■□□□□ 9.8
LARP4Q71RC2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.063e-8■□□□□ 9.8
LARP4Q71RC2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.093e-8■□□□□ 9.8
LARP4Q71RC2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.173e-8■□□□□ 9.8
LARP4Q71RC2 CYBA-205ENST00000565588 221 ntTSL 210.09□□□□□ -0.791e-12■□□□□ 9.8
LARP4Q71RC2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.89□□□□□ -1.318e-15■□□□□ 9.8
LARP4Q71RC2 TFPI-211ENST00000481132 7690 ntTSL 26.4□□□□□ -1.388e-15■□□□□ 9.8
LARP4Q71RC2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.32□□□□□ -1.48e-15■□□□□ 9.8
LARP4Q71RC2 TFPI-208ENST00000435414 687 ntTSL 55.35□□□□□ -1.558e-15■□□□□ 9.8
LARP4Q71RC2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.758e-15■□□□□ 9.8
LARP4Q71RC2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.818e-15■□□□□ 9.8
LARP4Q71RC2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.133e-9■□□□□ 9.8
LARP4Q71RC2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.94■□□□□ 0.33e-9■□□□□ 9.8
LARP4Q71RC2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.47■□□□□ 0.233e-9■□□□□ 9.8
LARP4Q71RC2 SERINC2-204ENST00000491976 2807 ntTSL 216.45■□□□□ 0.223e-9■□□□□ 9.8
LARP4Q71RC2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.64□□□□□ -0.073e-9■□□□□ 9.8
LARP4Q71RC2 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.417e-9■□□□□ 9.8
LARP4Q71RC2 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.517e-9■□□□□ 9.8
LARP4Q71RC2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.13e-7■□□□□ 9.8
LARP4Q71RC2 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC13.37□□□□□ -0.273e-7■□□□□ 9.8
LARP4Q71RC2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.37□□□□□ -0.273e-7■□□□□ 9.8
LARP4Q71RC2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.333e-7■□□□□ 9.8
LARP4Q71RC2 SEC13-216ENST00000479868 2374 ntTSL 1 (best)12.94□□□□□ -0.343e-7■□□□□ 9.8
LARP4Q71RC2 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.66□□□□□ -0.383e-7■□□□□ 9.8
LARP4Q71RC2 SEC13-219ENST00000492602 393 ntTSL 34.62□□□□□ -1.673e-7■□□□□ 9.8
LARP4Q71RC2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.92■■□□□ 1.263e-29■□□□□ 9.8
Retrieved 100 of 15,922 protein–RNA pairs in 242.9 ms