Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 AL139327.4-201ENST00000612362 153 ntBASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCDC141Q6ZP82 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC141Q6ZP82 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC141Q6ZP82 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC141Q6ZP82 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC141Q6ZP82 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC141Q6ZP82 AC140658.5-201ENST00000438532 169 ntBASIC26■■□□□ 1.75
CCDC141Q6ZP82 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC141Q6ZP82 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCDC141Q6ZP82 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CCDC141Q6ZP82 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC26■■□□□ 1.75
CCDC141Q6ZP82 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 AL035633.1-201ENST00000406139 838 ntBASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 WDR53-203ENST00000429115 683 ntTSL 2 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 AC005498.2-205ENST00000593218 784 ntBASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCDC141Q6ZP82 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 THTPA-204ENST00000554970 569 ntTSL 4 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 THTPA-206ENST00000556015 535 ntTSL 3 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 AC015911.4-201ENST00000588022 1070 ntBASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 AC129492.6-201ENST00000611383 1305 ntBASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
CCDC141Q6ZP82 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC25.97■■□□□ 1.75
CCDC141Q6ZP82 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC25.96■■□□□ 1.75
CCDC141Q6ZP82 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
CCDC141Q6ZP82 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
CCDC141Q6ZP82 AC090164.3-201ENST00000610780 2143 ntBASIC25.96■■□□□ 1.75
CCDC141Q6ZP82 LINC00304-203ENST00000565008 1864 ntBASIC25.96■■□□□ 1.75
CCDC141Q6ZP82 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms