Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 AC124864.1-201ENST00000623408 392 ntBASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 AC133963.1-201ENST00000504166 1679 ntBASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.85■□□□□ 0.13
NHLRC1Q6VVB1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 AP002383.4-201ENST00000442518 975 ntBASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 AC005336.2-201ENST00000593183 939 ntBASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 AL445228.2-201ENST00000605589 952 ntBASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 AC125634.1-201ENST00000438758 1403 ntBASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NHLRC1Q6VVB1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NHLRC1Q6VVB1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NHLRC1Q6VVB1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NHLRC1Q6VVB1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.83■□□□□ 0.13
NHLRC1Q6VVB1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NHLRC1Q6VVB1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NHLRC1Q6VVB1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AC005104.2-201ENST00000427818 678 ntBASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AC091607.1-201ENST00000490318 1060 ntBASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AC087388.1-201ENST00000571370 1112 ntBASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AL138831.2-201ENST00000606564 490 ntBASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AL121672.3-201ENST00000608644 468 ntBASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 LINC01451-201ENST00000623792 534 ntBASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.83■□□□□ 0.12
NHLRC1Q6VVB1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms