Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 RPS2P1-201ENST00000434010 821 ntBASIC20.9■□□□□ 0.94
CTR9Q6PD62 AP000347.1-202ENST00000435868 847 ntBASIC20.9■□□□□ 0.94
CTR9Q6PD62 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CTR9Q6PD62 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTR9Q6PD62 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTR9Q6PD62 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTR9Q6PD62 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CTR9Q6PD62 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.89■□□□□ 0.94
CTR9Q6PD62 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.89■□□□□ 0.93
CTR9Q6PD62 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 AC005104.2-201ENST00000427818 678 ntBASIC20.89■□□□□ 0.93
CTR9Q6PD62 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.89■□□□□ 0.93
CTR9Q6PD62 MIR7706-201ENST00000613747 67 ntBASIC20.89■□□□□ 0.93
CTR9Q6PD62 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.89■□□□□ 0.93
CTR9Q6PD62 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CTR9Q6PD62 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.89■□□□□ 0.93
CTR9Q6PD62 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 AC148477.5-201ENST00000625164 1645 ntBASIC20.89■□□□□ 0.93
CTR9Q6PD62 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CTR9Q6PD62 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.89■□□□□ 0.93
CTR9Q6PD62 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTR9Q6PD62 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 AC012317.2-201ENST00000623305 2251 ntBASIC20.88■□□□□ 0.93
CTR9Q6PD62 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 STK25P1-201ENST00000585406 838 ntBASIC20.88■□□□□ 0.93
CTR9Q6PD62 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.88■□□□□ 0.93
CTR9Q6PD62 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTR9Q6PD62 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 AC243591.1-201ENST00000452967 1364 ntBASIC20.87■□□□□ 0.93
CTR9Q6PD62 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 PRYP5-201ENST00000451909 266 ntBASIC20.87■□□□□ 0.93
CTR9Q6PD62 AC002558.1-201ENST00000488906 803 ntBASIC20.87■□□□□ 0.93
CTR9Q6PD62 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.87■□□□□ 0.93
CTR9Q6PD62 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTR9Q6PD62 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms