Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC62Q6P9F0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 NCF1C-201ENST00000438382 1427 ntBASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC62Q6P9F0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 AC004832.2-201ENST00000426397 482 ntBASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 GPX1P2-201ENST00000429271 606 ntBASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 KRT18P2-201ENST00000447938 1258 ntBASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 AC064836.3-201ENST00000607928 673 ntBASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC62Q6P9F0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 AC092183.1-201ENST00000469884 875 ntBASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 AC112482.1-201ENST00000492080 688 ntBASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms