Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 AD001527.2-201ENST00000622994 785 ntBASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 AC133963.1-201ENST00000504166 1679 ntBASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PPP4R3AQ6IN85 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 HLA-J-201ENST00000462773 1622 ntBASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PPP4R3AQ6IN85 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 AC091304.2-201ENST00000564639 760 ntBASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PPP4R3AQ6IN85 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 SIRPAP1-201ENST00000448467 1770 ntBASIC20■□□□□ 0.79
PPP4R3AQ6IN85 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 AL353593.2-201ENST00000602529 1483 ntBASIC20■□□□□ 0.79
PPP4R3AQ6IN85 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20■□□□□ 0.79
PPP4R3AQ6IN85 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 AL732292.2-201ENST00000609649 430 ntBASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 AP000867.4-201ENST00000641616 219 ntBASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R3AQ6IN85 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms